Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | CWC22_RS04830 | Not Available | Positive | 1127257 - 1128582 | 49377.2 |
| gtp diphosphokinase | CWC22_RS04835 | Not Available | Positive | 1128587 - 1130743 | 80976.2 |
| nucleoside triphosphate pyrophosphohydrolase | CWC22_RS04840 | Not Available | Positive | 1130746 - 1131546 | 29748.8 |
| ctp synthase | CWC22_RS04845 | Not Available | Positive | 1131650 - 1133284 | 60223.8 |
| phosphopyruvate hydratase | CWC22_RS04850 | Not Available | Positive | 1133470 - 1134762 | 45959.4 |
| hypothetical protein | CWC22_RS04855 | Not Available | Positive | 1134873 - 1135223 | 12285.8 |
| dna mismatch repair endonuclease muth | CWC22_RS04860 | Not Available | Negative | 1135261 - 1135935 | 24844.2 |
| rna pyrophosphohydrolase | CWC22_RS04865 | Not Available | Positive | 1136367 - 1136885 | 20889.0 |
| phosphoenolpyruvate--protein phosphotransferase | CWC22_RS04870 | Not Available | Positive | 1136979 - 1139258 | 85037.2 |
| sulfite exporter taue/safe family protein | CWC22_RS04875 | Not Available | Positive | 1139325 - 1140137 | 28173.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
