Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC0616 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain CVM N17EC0616 chromosome, complete genome.
Gene Summary
Adenine Count
1257187 bp
Thymine Count
1257221 bp
Guanine Count
1282567 bp
Cytosine Count
1278421 bp
Genome Length
5075396 bp
Protein-coding Genes
4504 genes
Non-Coding Genes
344 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (d)cmp kinase | D9G11_RS14915 | Not Available | Negative | 3106723 - 3107406 | 24747.8 |
| metallopeptidase ycal | D9G11_RS14920 | Not Available | Negative | 3107579 - 3108343 | 26738.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | D9G11_RS14925 | Not Available | Negative | 3108512 - 3109795 | 46183.8 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | D9G11_RS14930 | Not Available | Negative | 3109866 - 3110954 | 39842.6 |
| duf421 domain-containing protein | D9G11_RS14935 | Not Available | Negative | 3111153 - 3111845 | 26269.4 |
| 30s ribosomal protein s12 methylthiotransferase accessory factor ycao | D9G11_RS14940 | Not Available | Positive | 3111975 - 3113735 | 65615.9 |
| formate transporter foca | D9G11_RS14945 | Not Available | Positive | 3114141 - 3114998 | 30992.6 |
| formate c-acetyltransferase | D9G11_RS14950 | Not Available | Positive | 3115053 - 3117335 | 85376.1 |
| pyruvate formate lyase 1-activating protein | D9G11_RS14955 | Not Available | Positive | 3117527 - 3118267 | 28205.9 |
| nad(p)h oxidoreductase | D9G11_RS14960 | Not Available | Negative | 3118349 - 3118939 | 22979.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





