Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC0616 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain CVM N17EC0616 chromosome, complete genome.
Gene Summary
Adenine Count
1257187 bp
Thymine Count
1257221 bp
Guanine Count
1282567 bp
Cytosine Count
1278421 bp
Genome Length
5075396 bp
Protein-coding Genes
4504 genes
Non-Coding Genes
344 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent dihydropyrimidine dehydrogenase subunit pret | D9G11_RS08345 | Not Available | Negative | 1780186 - 1781424 | 44343.0 |
| duf2542 family protein | D9G11_RS08350 | Not Available | Negative | 1781618 - 1781857 | 9264.61 |
| outer membrane permeability protein sana | D9G11_RS08355 | Not Available | Negative | 1781860 - 1782579 | 27288.5 |
| is3-like element is1397 family transposase | D9G11_RS08360 | Not Available | Positive | 1782759 - 1784107 | 51809.4 |
| cytidine deaminase | D9G11_RS08365 | Not Available | Negative | 1784164 - 1785048 | 31626.6 |
| cidb/lrgb family autolysis modulator | D9G11_RS08370 | Not Available | Negative | 1785178 - 1785873 | 24471.1 |
| cida/lrga family protein | D9G11_RS08375 | Not Available | Negative | 1785870 - 1786268 | 14579.6 |
| trna dihydrouridine(16) synthase dusc | D9G11_RS08380 | Not Available | Positive | 1786507 - 1787457 | 35427.8 |
| small membrane protein yohp | D9G11_RS08385 | Not Available | Negative | 1787845 - 1787928 | 3092.28 |
| multidrug resistance outer membrane protein mdtq | D9G11_RS08390 | Not Available | Positive | 1788152 - 1789588 | 52211.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





