Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC0616 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain CVM N17EC0616 chromosome, complete genome.
Gene Summary
Adenine Count
1257187 bp
Thymine Count
1257221 bp
Guanine Count
1282567 bp
Cytosine Count
1278421 bp
Genome Length
5075396 bp
Protein-coding Genes
4504 genes
Non-Coding Genes
344 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9G11_RS05995 | Not Available | Positive | 1256252 - 1256728 | 17851.2 |
| duf3732 domain-containing protein | D9G11_RS06000 | Not Available | Negative | 1256783 - 1258603 | 70209.9 |
| three component abc system middle component | D9G11_RS06005 | Not Available | Negative | 1258603 - 1259049 | 16692.7 |
| hypothetical protein | D9G11_RS06010 | Not Available | Negative | 1259046 - 1260245 | 46311.8 |
| integrase domain-containing protein | D9G11_RS06015 | Not Available | Negative | 1260460 - 1261689 | 46637.5 |
| Tmrna,resume consensus sequence (at 83): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 1261855 - 1262217 | Not Available |
| ssra-binding protein smpb | D9G11_RS06025 | Not Available | Negative | 1262432 - 1262914 | 18270.1 |
| type ii toxin-antitoxin system toxin rata | D9G11_RS06030 | Not Available | Positive | 1263085 - 1263522 | 16220.6 |
| rnfh family protein | D9G11_RS06035 | Not Available | Positive | 1263512 - 1263802 | 10804.0 |
| outer membrane protein assembly factor bame | D9G11_RS06040 | Not Available | Negative | 1263864 - 1264205 | 12332.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





