Pseudomonas amygdali pv. tabaci str. ATCC 11528

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas amygdali pv. tabaci str. ATCC 11528 is a Gram-negative bacterium characterized by its rod shape and mobility. This strain possesses two replicons, indicating a complex genetic structure that may contribute to its adaptability and survival in various environments. The strain is cataloged under the accessions NZ_CP042804.1 and NZ_CP042805.1, which provide genomic data that can be utilized for further research and characterization. As a member of the Pseudomonas genus, Pseudomonas amygdali pv. tabaci is known for its ecological versatility and potential pathogenicity, particularly in relation to its interaction with plant hosts. Its mobility suggests an ability to navigate its environment effectively, which can facilitate colonization and infection processes in plants. This trait is particularly significant in the context of agricultural health, as it may influence the spread of disease in crops. Understanding the genetic makeup and biological traits of Pseudomonas amygdali pv. tabaci str. ATCC 11528 is essential for developing effective management strategies against plant diseases it may cause. By studying its replicons and mobility, researchers can gain insights into its evolutionary adaptations, potentially informing practices to mitigate its impact on agriculture and plant health ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas amygdali
Strainpv. tabaci ATCC 11528

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas amygdali pv. tabaci str. ATCC 11528
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas amygdali pv. tabaci str. ATCC 11528 plasmid pTab1,

Gene Summary

Adenine Count

15729 bp

Thymine Count

14612 bp

Guanine Count

18793 bp

Cytosine Count

19028 bp

Genome Length

68162 bp

Protein-coding Genes

74 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar-binding transcriptional regulatorPSYTB_RS11670Not AvailableNegative2461529 - 246248234822.1
sdr family oxidoreductasePSYTB_RS11675Not AvailableNegative2462564 - 246336429025.5
sdr family oxidoreductasePSYTB_RS11680Not AvailableNegative2463395 - 246415926374.9
sugar abc transporter atp-binding proteinPSYTB_RS11685Not AvailableNegative2464191 - 246572054852.7
sugar abc transporter substrate-binding proteinPSYTB_RS11690Not AvailableNegative2465736 - 246666832073.8
abc transporter permeasePSYTB_RS11695Not AvailableNegative2466732 - 246773634518.3
transketolasePSYTB_RS11700Not AvailablePositive2468097 - 246893330152.0
transketolase family proteinPSYTB_RS11705Not AvailablePositive2468923 - 246985532797.5
fggy family carbohydrate kinasePSYTB_RS11710Not AvailablePositive2469886 - 247136152125.5
methyl-accepting chemotaxis proteinPSYTB_RS11715Not AvailablePositive2471754 - 247337658365.7

Displaying genes 2301 – 2310 of 5558 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.