Pseudomonas amygdali pv. tabaci str. ATCC 11528

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas amygdali pv. tabaci str. ATCC 11528 is a Gram-negative bacterium characterized by its rod shape and mobility. This strain possesses two replicons, indicating a complex genetic structure that may contribute to its adaptability and survival in various environments. The strain is cataloged under the accessions NZ_CP042804.1 and NZ_CP042805.1, which provide genomic data that can be utilized for further research and characterization. As a member of the Pseudomonas genus, Pseudomonas amygdali pv. tabaci is known for its ecological versatility and potential pathogenicity, particularly in relation to its interaction with plant hosts. Its mobility suggests an ability to navigate its environment effectively, which can facilitate colonization and infection processes in plants. This trait is particularly significant in the context of agricultural health, as it may influence the spread of disease in crops. Understanding the genetic makeup and biological traits of Pseudomonas amygdali pv. tabaci str. ATCC 11528 is essential for developing effective management strategies against plant diseases it may cause. By studying its replicons and mobility, researchers can gain insights into its evolutionary adaptations, potentially informing practices to mitigate its impact on agriculture and plant health ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas amygdali
Strainpv. tabaci ATCC 11528

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas amygdali pv. tabaci str. ATCC 11528
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas amygdali pv. tabaci str. ATCC 11528 plasmid pTab1,

Gene Summary

Adenine Count

15729 bp

Thymine Count

14612 bp

Guanine Count

18793 bp

Cytosine Count

19028 bp

Genome Length

68162 bp

Protein-coding Genes

74 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acyloxyacyl hydrolasePSYTB_RS05255Not AvailablePositive1085759 - 108627719054.2
ykgj family cysteine cluster proteinPSYTB_RS05265Not AvailableNegative1086717 - 108707313017.6
duf2878 domain-containing proteinPSYTB_RS05270Not AvailableNegative1087028 - 108753718118.7
sam-dependent methyltransferasePSYTB_RS05275Not AvailableNegative1087530 - 108879847621.3
duf1365 domain-containing proteinPSYTB_RS05280Not AvailableNegative1088785 - 108958530235.2
nad(p)/fad-dependent oxidoreductasePSYTB_RS05285Not AvailableNegative1089582 - 109082946359.8
sdr family nad(p)-dependent oxidoreductasePSYTB_RS05290Not AvailableNegative1090826 - 109161428578.0
nuclear transport factor 2 family proteinPSYTB_RS05295Not AvailableNegative1091611 - 109203316471.5
deoxyribodipyrimidine photo-lyasePSYTB_RS05300Not AvailableNegative1092026 - 109347454616.1
merr family transcriptional regulatorPSYTB_RS05305Not AvailableNegative1093484 - 109438633681.8

Displaying genes 1081 – 1090 of 5558 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.