Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 186 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain 186
Gene Summary
Adenine Count
598269 bp
Thymine Count
590993 bp
Guanine Count
871384 bp
Cytosine Count
883270 bp
Genome Length
2943916 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase factor sigma-54 | CG010_RS00045 | Not Available | Negative | 7684 - 9234 | 56812.1 |
| lps export abc transporter atp-binding protein | CG010_RS00050 | Not Available | Negative | 9500 - 10309 | 29346.5 |
| lpta/osta family protein | CG010_RS00055 | Not Available | Negative | 10319 - 10879 | 19776.7 |
| lps export abc transporter periplasmic protein lptc | CG010_RS00060 | Not Available | Negative | 10896 - 11561 | 23763.6 |
| signal peptide peptidase sppa | CG010_RS00065 | Not Available | Positive | 11796 - 12749 | 34703.1 |
| integration host factor subunit beta | CG010_RS00070 | Not Available | Positive | 12776 - 13078 | 11295.3 |
| lapa family protein | CG010_RS00075 | Not Available | Positive | 13145 - 13486 | 12399.5 |
| class i sam-dependent methyltransferase | CG010_RS00080 | Not Available | Positive | 13580 - 14713 | 41787.2 |
| trmh family rna methyltransferase | CG010_RS00085 | Not Available | Positive | 14710 - 15570 | 30889.8 |
| signal peptidase ii | CG010_RS00090 | Not Available | Positive | 15570 - 16058 | 18207.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


