Agrobacterium tumefaciens strain 186

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens strain 186 is a gram-negative, rod-shaped bacterium that plays a significant role in plant pathology, particularly through its association with viridiplantae hosts. This microbe is an aerobe and exhibits mobility due to the presence of flagella, which facilitates its movement in various habitats. The optimal growth temperature for this strain is 25°C, and it thrives within a mesophilic temperature range. Strain 186 is notable for its biotic relationship as a free-living organism and is known to infect a wide variety of plant hosts, including Triticum aestivum (wheat), Solanum tuberosum (potato), Solanum lycopersicum (tomato), and Oryza sativa (rice), among others. The bacterium is infamous for causing crown gall disease, characterized by tumor formation on infected plants. The disease manifests through crown and cane gall symptoms, which can significantly impact plant health and agricultural yield. The genetic makeup of Agrobacterium tumefaciens strain 186 is complex, comprising four replicons and two membranes, which are characteristic of its intracellular processes. The presence of multiple accessions, including NZ_CP042274.1, NZ_CP042276.1, NZ_CP042277.1, and NZ_CP042275.2, indicates the strain's genetic diversity and adaptability. Ecologically, A. tumefaciens serves as a model for understanding plant-microbe interactions and the mechanisms underlying tumorigenesis in plants. Its ability to transfer genetic material to host plants has implications for biotechnology, particularly in the development of genetically modified crops. Thus, studying this strain contributes valuable insights into both plant pathology and agricultural biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
Strainstrain 186

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens strain 186
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Viridiplantae, Triticum aestivum, Solanum tuberosum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens strain 186 chromosome Circular, complete

Gene Summary

Adenine Count

598269 bp

Thymine Count

590993 bp

Guanine Count

871384 bp

Cytosine Count

883270 bp

Genome Length

2943916 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cell envelope integrity eipb family proteinCG010_RS05010Not AvailablePositive1025289 - 102608929376.5
hypothetical proteinCG010_RS27395Not AvailablePositive1026150 - 10262754597.86
30s ribosomal protein s2CG010_RS05015Not AvailablePositive1026282 - 102704928214.8
translation elongation factor tsCG010_RS05020Not AvailablePositive1027412 - 102833832280.8
ump kinaseCG010_RS05025Not AvailablePositive1028436 - 102915824927.3
ribosome recycling factorCG010_RS05030Not AvailablePositive1029221 - 102977820645.8
isoprenyl transferaseCG010_RS05035Not AvailablePositive1029844 - 103058727881.3
phosphatidate cytidylyltransferaseCG010_RS05040Not AvailablePositive1030587 - 103142029165.9
rip metalloprotease rsepCG010_RS05045Not AvailablePositive1031470 - 103259139757.7
outer membrane protein assembly factor bamaCG010_RS05050Not AvailablePositive1032791 - 103511584108.9

Displaying genes 1051 – 1060 of 5441 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
TumorsCausesPMC177831
Crown gall diseaseCausesPMC2241609
Crown gall diseaseCausesPMC2653234
Crown gall diseaseCausesPMC11575935
Crown and cane gall symptomsCausesPMC12602688
Crown and cane gallsCausesPMC12602688
Crown gall diseaseCausesPMC9343901
Crown gallCausesPMC12030312
Crown-gall diseaseCausesPMC7248198
Crown gall tumorsCausesPMC8087989

Displaying health effects 1 – 10 of 11 in total