Escherichia coli strain FC853_EC

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FC853_EC is a Gram-negative, rod-shaped bacterium that typically lives in host-associated environments. It exhibits a cell arrangement of singles and pairs, and is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic conditions. This strain is motile and possesses flagella, which may assist in its movement within various hosts. The optimal growth temperature for FC853_EC is 37°C, placing it within the mesophilic temperature range, which is conducive to its survival in warm-blooded hosts, including humans (Homo sapiens) and a variety of other animals such as Gallus gallus (chickens), Bos taurus (cattle), and Canis lupus familiaris (domestic dogs). It has been observed in numerous hosts across multiple taxa, indicating its wide ecological niche. FC853_EC is associated with a range of health effects, particularly in humans, where it is known to cause urinary tract infections (UTIs), gastrointestinal infections, and serious conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). The strain's pathogenicity highlights its potential to cause significant health issues, particularly in vulnerable populations like neonates. With five replicons and two membranes, FC853_EC's genetic and structural characteristics support its adaptability and pathogenic potential. Given its diverse range of hosts and associated health risks, FC853_EC plays a notable role in public health, particularly concerning foodborne infections and the transmission of antibiotic resistance within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FC853_EC

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FC853_EC
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FC853_EC plasmid p853EC2, complete

Gene Summary

Adenine Count

13512 bp

Thymine Count

13799 bp

Guanine Count

9673 bp

Cytosine Count

12481 bp

Genome Length

49465 bp

Protein-coding Genes

18 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system minor pseudopilin gspkFH485_RS03215Not AvailablePositive660025 - 66100236502.3
type ii secretion system protein gsplFH485_RS03220Not AvailablePositive660999 - 66217744369.6
gspm family type ii secretion system protein yghdFH485_RS03225Not AvailablePositive662179 - 66271520388.7
abc transporter permeaseFH485_RS03230Not AvailablePositive663772 - 66454829577.5
abc transporter atp-binding proteinFH485_RS03235Not AvailablePositive664545 - 66521325132.2
is1 family transposaseFH485_RS03240Not AvailablePositive665264 - 66596126519.2
udp-glucose 4-epimerase galeFH485_RS03245Not AvailablePositive666011 - 66703638013.6
sulfotransferase family proteinFH485_RS03250Not AvailablePositive667146 - 66890068384.2
glycosyltransferase family 2 proteinFH485_RS03255Not AvailablePositive669285 - 67135779539.5
polysaccharide pyruvyl transferase family proteinFH485_RS03260Not AvailablePositive671354 - 67248143404.3

Displaying genes 1291 – 1300 of 5520 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total