Enterococcus faecium strain DB-1

Gram-positiveCocciFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Enterococcaceae

Genus

Enterococcus

Description

Enterococcus faecium strain DB-1 is a Gram-positive, facultative anaerobic coccus commonly found in fermented mare milk. This bacterium has been associated with several health issues in humans, including endocarditis, nosocomial infections, bloodstream infections, urinary tract infections, biliary tract infections, and pancreatic necrosis. Its pathogenicity in humans suggests a significant role in clinical settings, particularly in nosocomial bacteremia. The strain possesses four replicons, indicating a complex genetic structure that may contribute to its adaptability and survival in various environments. The diverse range of hosts for Enterococcus faecium strain DB-1 includes humans (Homo sapiens), domestic animals such as cattle (Bos taurus), pigs (Sus scrofa), and poultry (Gallus gallus and Meleagris gallopavo), as well as other metazoans, highlighting its ecological versatility. The presence of flagella, although not typical for all Enterococcus species, may suggest an enhanced motility that could facilitate its spread within host organisms or environments. This trait, combined with its ability to survive in both aerobic and anaerobic conditions, underscores the bacterium's adaptability. In summary, Enterococcus faecium strain DB-1 exemplifies a significant human pathogen with a complex ecological presence, capable of inhabiting diverse host species. Its association with fermented mare milk and its potential for causing serious infections in humans point to the intricate interactions between human health and microbial ecology. Understanding such relationships can aid in developing strategies to manage infections caused by this opportunistic pathogen.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyEnterococcaceae
GenusEnterococcus
SpeciesEnterococcus faecium
Strainstrain DB-1

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Enterococcus faecium strain DB-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfermented mare milk
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Enterococcus faecium strain DB-1 chromosome, complete genome.

Gene Summary

Adenine Count

817875 bp

Thymine Count

825983 bp

Guanine Count

507317 bp

Cytosine Count

509820 bp

Genome Length

2660995 bp

Protein-coding Genes

2446 genes

Non-Coding Genes

179 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
polysaccharide biosynthesis proteinFHJ99_RS12465Not AvailableNegative2341679 - 234270138600.6
nad-dependent epimerase/dehydratase family proteinFHJ99_RS12470Not AvailableNegative2342748 - 234363233927.8
sugar transferaseFHJ99_RS12475Not AvailableNegative2343629 - 234424322979.2
polysaccharide biosynthesis proteinFHJ99_RS12480Not AvailableNegative2344254 - 234607167468.9
tyrosine-protein phosphataseFHJ99_RS12485Not AvailableNegative2346084 - 234684828772.9
cpsd/capb family tyrosine-protein kinaseFHJ99_RS12490Not AvailableNegative2346887 - 234758524847.8
yvek family proteinFHJ99_RS12495Not AvailableNegative2347597 - 234837628253.3
lcp family proteinFHJ99_RS12500Not AvailableNegative2348392 - 234933635364.4
hypothetical proteinFHJ99_RS12505Not AvailableNegative2349382 - 235016129017.3
glycine--trna ligase subunit betaFHJ99_RS12510Not AvailableNegative2350551 - 235262678691.2

Displaying genes 2321 – 2330 of 2834 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Urinary tract infectionsCausesPMC11784074
EndocarditisCausesPMC11784074
Bloodstream infectionsCausesPMC11784074
Human infectionCausesPMC6222123
Nosocomial infectionCausesPMC6222123
EndocarditisCausesPMC6385395
Infected pancreatic necrosisCausesPMC9466706
Systemic infectionCausesPMC9466706
Nosocomial infectionsCausesPMC5727370
Urinary tract infectionsCausesPMC8879582

Displaying health effects 1 – 10 of 13 in total