Enterococcus faecium strain DB-1

Gram-positiveCocciFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Enterococcaceae

Genus

Enterococcus

Description

Enterococcus faecium strain DB-1 is a Gram-positive, facultative anaerobic coccus commonly found in fermented mare milk. This bacterium has been associated with several health issues in humans, including endocarditis, nosocomial infections, bloodstream infections, urinary tract infections, biliary tract infections, and pancreatic necrosis. Its pathogenicity in humans suggests a significant role in clinical settings, particularly in nosocomial bacteremia. The strain possesses four replicons, indicating a complex genetic structure that may contribute to its adaptability and survival in various environments. The diverse range of hosts for Enterococcus faecium strain DB-1 includes humans (Homo sapiens), domestic animals such as cattle (Bos taurus), pigs (Sus scrofa), and poultry (Gallus gallus and Meleagris gallopavo), as well as other metazoans, highlighting its ecological versatility. The presence of flagella, although not typical for all Enterococcus species, may suggest an enhanced motility that could facilitate its spread within host organisms or environments. This trait, combined with its ability to survive in both aerobic and anaerobic conditions, underscores the bacterium's adaptability. In summary, Enterococcus faecium strain DB-1 exemplifies a significant human pathogen with a complex ecological presence, capable of inhabiting diverse host species. Its association with fermented mare milk and its potential for causing serious infections in humans point to the intricate interactions between human health and microbial ecology. Understanding such relationships can aid in developing strategies to manage infections caused by this opportunistic pathogen.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyEnterococcaceae
GenusEnterococcus
SpeciesEnterococcus faecium
Strainstrain DB-1

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Enterococcus faecium strain DB-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfermented mare milk
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Enterococcus faecium strain DB-1 chromosome, complete genome.

Gene Summary

Adenine Count

817875 bp

Thymine Count

825983 bp

Guanine Count

507317 bp

Cytosine Count

509820 bp

Genome Length

2660995 bp

Protein-coding Genes

2446 genes

Non-Coding Genes

179 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna primaseFHJ99_RS07900Not AvailablePositive1470080 - 147192170904.5
rna polymerase sigma factor rpodFHJ99_RS07905Not AvailablePositive1471945 - 147305441883.1
cell division site-positioning protein mapz family proteinFHJ99_RS07910Not AvailablePositive1473274 - 147537378436.8
virulence factor b family proteinFHJ99_RS07915Not AvailablePositive1475569 - 147643232256.8
fur family transcriptional regulatorFHJ99_RS07920Not AvailablePositive1476537 - 147701018334.2
site-specific tyrosine recombinase xerdFHJ99_RS07925Not AvailablePositive1477106 - 147799334342.5
gnat family n-acetyltransferaseFHJ99_RS07930Not AvailablePositive1478012 - 147838314398.2
segregation/condensation protein aFHJ99_RS07935Not AvailablePositive1478380 - 147915029887.2
smc-scp complex subunit scpbFHJ99_RS07940Not AvailablePositive1479134 - 147970320965.9
pseudouridine synthaseFHJ99_RS07945Not AvailablePositive1479709 - 148042526759.7

Displaying genes 1531 – 1540 of 2834 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Urinary tract infectionsCausesPMC11784074
EndocarditisCausesPMC11784074
Bloodstream infectionsCausesPMC11784074
Human infectionCausesPMC6222123
Nosocomial infectionCausesPMC6222123
EndocarditisCausesPMC6385395
Infected pancreatic necrosisCausesPMC9466706
Systemic infectionCausesPMC9466706
Nosocomial infectionsCausesPMC5727370
Urinary tract infectionsCausesPMC8879582

Displaying health effects 1 – 10 of 13 in total