Staphylococcus epidermidis strain HD43

Gram-positiveCocciNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Staphylococcaceae

Genus

Staphylococcus

Description

Staphylococcus epidermidis strain HD43 is a Gram-positive cocci bacterium that typically exists in clusters or singles. It is a facultative anaerobe, capable of surviving in both aerobic and anaerobic environments, and thrives optimally at a temperature of 30°C, falling within the mesophilic temperature range. This strain is non-motile, indicating the absence of flagella, and possesses one membrane and one replicon. S. epidermidis strain HD43 is associated with various hosts, including Homo sapiens (humans), Bos taurus (cattle), Phocidae (seals), and Equidae (horses). It exhibits a free-living biotic relationship, highlighting its ecological versatility. Despite its presence in diverse habitats, this bacterium is known to cause several health issues, particularly in humans. It has been implicated in urinary tract infections (UTIs), peritonitis, bloodstream infections, late-onset sepsis, pyelonephritis, prosthetic valve endocarditis, central venous catheter infections, cerebrospinal fluid shunt meningitis, acute bacterial meningitis, and infections related to implanted cardiac devices. These infections are often associated with biomaterials, suggesting that S. epidermidis can act as a pathogen in clinical settings, particularly when medical devices are involved. Understanding the pathogenic potential of S. epidermidis strain HD43 is crucial, especially in hospital environments where its presence on biomaterials can lead to serious health complications. The ability of this strain to inhabit diverse hosts and cause a range of infections underscores its significance in both microbiology and clinical medicine.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyStaphylococcaceae
GenusStaphylococcus
SpeciesStaphylococcus epidermidis
Strainstrain HD43

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Staphylococcus epidermidis strain HD43
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Bos taurus, Ovis aries
Cell arrangementClusters - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Staphylococcus epidermidis strain HD43


Gene Summary

Adenine Count

835113 bp

Thymine Count

811611 bp

Guanine Count

391117 bp

Cytosine Count

384349 bp

Genome Length

2424890 bp

Protein-coding Genes

2222 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dsre/dsrf/drsh-like family proteinFH487_RS00300Not AvailableNegative62735 - 6380540303.6
persulfide-sensing transcriptional repressor cstrFH487_RS00305Not AvailablePositive63944 - 642049812.05
sulfite exporter taue/safe family proteinFH487_RS00310Not AvailablePositive64219 - 6495926111.1
arsenate reductase (thioredoxin)FH487_RS00315Not AvailableNegative65020 - 6541514693.4
arsenite efflux transporter membrane subunit arsbFH487_RS00320Not AvailableNegative65434 - 6672646928.7
arsr/smtb family transcription factorFH487_RS00325Not AvailableNegative66726 - 6704011661.1
fad-dependent oxidoreductaseFH487_RS00330Not AvailableNegative67037 - 6870162116.3
arsenical pump-driving atpaseFH487_RS00335Not AvailableNegative68701 - 7042265142.5
arsenite efflux transporter metallochaperone arsdFH487_RS00340Not AvailableNegative70409 - 7075612910.3
hypothetical proteinFH487_RS00345Not AvailablePositive71039 - 712337511.06

Displaying genes 81 – 90 of 2309 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
PyelonephritisCausesPMC4308012
Prosthetic valve endocarditisCausesPMC4308012
Central venous catheter infectionsCausesPMC4308012
Cerebrospinal fluid shunt meningitisCausesPMC4308012
UtiCausesPMC4308012
Late-onset sepsisCausesPMC4601917
Infections of implanted cardiac devicesCausesPMC6060398
Acute bacterial meningitisCausesPMC6306750
Bloodstream infectionsCausesPMC8471643
PeritonitisCausesPMC7747055

Displaying health effects 1 – 10 of 11 in total