Staphylococcus epidermidis strain HD43

Gram-positiveCocciNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Staphylococcaceae

Genus

Staphylococcus

Description

Staphylococcus epidermidis strain HD43 is a Gram-positive cocci bacterium that typically exists in clusters or singles. It is a facultative anaerobe, capable of surviving in both aerobic and anaerobic environments, and thrives optimally at a temperature of 30°C, falling within the mesophilic temperature range. This strain is non-motile, indicating the absence of flagella, and possesses one membrane and one replicon. S. epidermidis strain HD43 is associated with various hosts, including Homo sapiens (humans), Bos taurus (cattle), Phocidae (seals), and Equidae (horses). It exhibits a free-living biotic relationship, highlighting its ecological versatility. Despite its presence in diverse habitats, this bacterium is known to cause several health issues, particularly in humans. It has been implicated in urinary tract infections (UTIs), peritonitis, bloodstream infections, late-onset sepsis, pyelonephritis, prosthetic valve endocarditis, central venous catheter infections, cerebrospinal fluid shunt meningitis, acute bacterial meningitis, and infections related to implanted cardiac devices. These infections are often associated with biomaterials, suggesting that S. epidermidis can act as a pathogen in clinical settings, particularly when medical devices are involved. Understanding the pathogenic potential of S. epidermidis strain HD43 is crucial, especially in hospital environments where its presence on biomaterials can lead to serious health complications. The ability of this strain to inhabit diverse hosts and cause a range of infections underscores its significance in both microbiology and clinical medicine.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyStaphylococcaceae
GenusStaphylococcus
SpeciesStaphylococcus epidermidis
Strainstrain HD43

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Staphylococcus epidermidis strain HD43
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Bos taurus, Ovis aries
Cell arrangementClusters - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Staphylococcus epidermidis strain HD43 chromosome.

Gene Summary

Adenine Count

835113 bp

Thymine Count

811611 bp

Guanine Count

391117 bp

Cytosine Count

384349 bp

Genome Length

2424890 bp

Protein-coding Genes

2222 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s13FH487_RS03250Not AvailablePositive695022 - 69538713718.7
30s ribosomal protein s11FH487_RS03255Not AvailablePositive695410 - 69579913896.8
dna-directed rna polymerase subunit alphaFH487_RS03260Not AvailablePositive695876 - 69682034987.7
50s ribosomal protein l17FH487_RS03265Not AvailablePositive696837 - 69720513663.5
energy-coupling factor transporter atpaseFH487_RS03270Not AvailablePositive697536 - 69834529633.7
energy-coupling factor transporter atpaseFH487_RS03275Not AvailablePositive698342 - 69920232842.8
energy-coupling factor transporter transmembrane component t family proteinFH487_RS03280Not AvailablePositive699192 - 69999831005.7
trna pseudouridine(38-40) synthase truaFH487_RS03285Not AvailablePositive700002 - 70080531563.6
50s ribosomal protein l13FH487_RS03290Not AvailablePositive701065 - 70150216336.4
30s ribosomal protein s9FH487_RS03295Not AvailablePositive701522 - 70191414646.6

Displaying genes 651 – 660 of 2309 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
PyelonephritisCausesPMC4308012
Prosthetic valve endocarditisCausesPMC4308012
Central venous catheter infectionsCausesPMC4308012
Cerebrospinal fluid shunt meningitisCausesPMC4308012
UtiCausesPMC4308012
Late-onset sepsisCausesPMC4601917
Infections of implanted cardiac devicesCausesPMC6060398
Acute bacterial meningitisCausesPMC6306750
Bloodstream infectionsCausesPMC8471643
PeritonitisCausesPMC7747055

Displaying health effects 1 – 10 of 11 in total