Thermococcus indicus strain IOH1

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Thermococcus

Description

Thermococcus indicus strain IOH1 is a Gram-negative archaeon characterized by the presence of flagella, which suggests motility. It possesses a single replicon, indicating a streamlined genomic organization that is common in archaeal species. The strain is cataloged under the accession number NZ_CP040846.1, providing a reference point for further genomic and functional studies. As a member of the Thermococcaceae family, Thermococcus indicus is adapted to extreme environments, typically thriving in high-temperature habitats such as hydrothermal vents. The presence of flagella may facilitate movement toward optimal conditions for growth and survival, enhancing its ability to colonize such extreme niches. From a biological and ecological perspective, the traits of Thermococcus indicus strain IOH1 highlight the adaptability of extremophiles to harsh environments. The single replicon suggests a potential for efficient replication and gene expression, which can be advantageous in fluctuating thermal conditions. Understanding the motility mechanisms and genomic organization of this strain can provide insights into the evolutionary strategies employed by microorganisms in extreme ecosystems. This knowledge is crucial for appreciating the role of such extremophiles in biogeochemical cycles and their potential applications in biotechnology.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusThermococcus
SpeciesThermococcus indicus
Strainstrain IOH1

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermococcus indicus strain IOH1 chromosome, complete genome.

Gene Summary

Adenine Count

501267 bp

Thymine Count

502817 bp

Guanine Count

613638 bp

Cytosine Count

608614 bp

Genome Length

2226336 bp

Protein-coding Genes

2395 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleotidyltransferase domain-containing proteinFH039_RS09255Not AvailablePositive1720672 - 172108815767.4
segregation and condensation protein aFH039_RS09260Not AvailablePositive1721094 - 172175325966.3
hypothetical proteinFH039_RS09265Not AvailableNegative1721750 - 172218116528.3
duf5658 family proteinFH039_RS09270Not AvailablePositive1722315 - 172273114951.7
dead/deah box helicaseFH039_RS09275Not AvailablePositive1722735 - 172508088852.2
potassium channel family proteinFH039_RS09280Not AvailableNegative1725181 - 172575921777.5
potassium channel family proteinFH039_RS09285Not AvailableNegative1725752 - 172636022688.3
magnesium transporterFH039_RS09290Not AvailablePositive1726469 - 172766243237.5
sugar phosphate isomerase/epimerase family proteinFH039_RS09295Not AvailablePositive1727663 - 172843029335.2
acetate--coa ligase family proteinFH039_RS09300Not AvailablePositive1728534 - 172995251169.1

Displaying genes 1881 – 1890 of 2447 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.