Paenibacillus polymyxa strain ZF129

Gram-positiveRodMotileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus polymyxa strain ZF129 is a Gram-positive, rod-shaped bacterium that exhibits motility due to the presence of flagella. This strain is classified as a facultative anaerobe, allowing it to thrive in various oxygen environments. It primarily functions as a chemoheterotroph, utilizing organic compounds for energy. The optimal growth temperature for this strain is 37°C, placing it within the mesophilic temperature range. P. polymyxa strain ZF129 is notable for its ability to sporulate, which can contribute to its survival in diverse habitats. This bacterium is free-living, indicating it does not rely on a host for its existence. However, it has been identified in association with several hosts, including Gallus gallus (domestic chicken), various plant species like Triticum aestivum (wheat), Solanum lycopersicum (tomato), Zea mays subsp. mays (maize), Arachis hypogaea (peanut), and Arabidopsis thaliana (a model organism in plant biology). The presence of three replicons in its genomic structure suggests a complex genetic organization, which may play a role in its adaptability and ecological interactions. The diverse range of associated hosts indicates that P. polymyxa strain ZF129 may have beneficial implications in agriculture, potentially aiding in plant growth or health through interactions within various ecosystems. This highlights the ecological importance of this strain in promoting plant-microbe relationships, which can be crucial for sustainable agricultural practices.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus polymyxa
Strainstrain ZF129

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Paenibacillus polymyxa strain ZF129
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Gallus gallus, Viridiplantae, Triticum aestivum
Cell arrangementNot Available
SporulationSporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Paenibacillus polymyxa strain ZF129 plasmid pAP2, complete

Gene Summary

Adenine Count

11162 bp

Thymine Count

10601 bp

Guanine Count

8738 bp

Cytosine Count

7101 bp

Genome Length

37602 bp

Protein-coding Genes

42 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
osmc family proteinFGY93_RS03915Not AvailableNegative927899 - 92832415363.5
amino acid abc transporter atp-binding proteinFGY93_RS03920Not AvailableNegative928374 - 92912327434.7
amino acid abc transporter permeaseFGY93_RS03925Not AvailableNegative929138 - 92978523935.2
transporter substrate-binding domain-containing proteinFGY93_RS03930Not AvailableNegative929871 - 93072831319.7
tetr/acrr family transcriptional regulatorFGY93_RS03935Not AvailableNegative930828 - 93150525319.6
phosphoribosylamine--glycine ligaseFGY93_RS03940Not AvailableNegative931635 - 93290044820.8
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolaseFGY93_RS03945Not AvailableNegative932964 - 93450855587.6
phosphoribosylglycinamide formyltransferaseFGY93_RS03950Not AvailableNegative934639 - 93525321671.2
phosphoribosylformylglycinamidine cyclo-ligaseFGY93_RS03955Not AvailableNegative935253 - 93629336880.6
amidophosphoribosyltransferaseFGY93_RS03960Not AvailableNegative937010 - 93849154156.3

Displaying genes 921 – 930 of 5141 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.