Paenibacillus polymyxa strain ZF129

Gram-positiveRodMotileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus polymyxa strain ZF129 is a Gram-positive, rod-shaped bacterium that exhibits motility due to the presence of flagella. This strain is classified as a facultative anaerobe, allowing it to thrive in various oxygen environments. It primarily functions as a chemoheterotroph, utilizing organic compounds for energy. The optimal growth temperature for this strain is 37°C, placing it within the mesophilic temperature range. P. polymyxa strain ZF129 is notable for its ability to sporulate, which can contribute to its survival in diverse habitats. This bacterium is free-living, indicating it does not rely on a host for its existence. However, it has been identified in association with several hosts, including Gallus gallus (domestic chicken), various plant species like Triticum aestivum (wheat), Solanum lycopersicum (tomato), Zea mays subsp. mays (maize), Arachis hypogaea (peanut), and Arabidopsis thaliana (a model organism in plant biology). The presence of three replicons in its genomic structure suggests a complex genetic organization, which may play a role in its adaptability and ecological interactions. The diverse range of associated hosts indicates that P. polymyxa strain ZF129 may have beneficial implications in agriculture, potentially aiding in plant growth or health through interactions within various ecosystems. This highlights the ecological importance of this strain in promoting plant-microbe relationships, which can be crucial for sustainable agricultural practices.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus polymyxa
Strainstrain ZF129

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Paenibacillus polymyxa strain ZF129
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Gallus gallus, Viridiplantae, Triticum aestivum
Cell arrangementNot Available
SporulationSporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Paenibacillus polymyxa strain ZF129 plasmid pAP2, complete

Gene Summary

Adenine Count

11162 bp

Thymine Count

10601 bp

Guanine Count

8738 bp

Cytosine Count

7101 bp

Genome Length

37602 bp

Protein-coding Genes

42 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dcus/malk family sensor histidine kinaseFGY93_RS16795Not AvailablePositive3786461 - 378811660599.8
two-component system response regulator dcurFGY93_RS16800Not AvailablePositive3788109 - 378881626762.5
2-hydroxycarboxylate transporter family proteinFGY93_RS16805Not AvailablePositive3788937 - 379028347614.5
nadp-dependent malic enzymeFGY93_RS16810Not AvailablePositive3790346 - 379154242726.9
hypothetical proteinFGY93_RS16815Not AvailablePositive3791728 - 379210212869.2
yfhd family proteinFGY93_RS16820Not AvailablePositive3792127 - 37923127211.41
50s ribosomal protein l11 methyltransferaseFGY93_RS16825Not AvailablePositive3792543 - 379350835694.2
site-2 protease family proteinFGY93_RS16830Not AvailablePositive3793511 - 379420326066.7
16s rrna (uracil(1498)-n(3))-methyltransferaseFGY93_RS16835Not AvailablePositive3794364 - 379512828178.8
trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtabFGY93_RS16840Not AvailablePositive3795130 - 379647350763.0

Displaying genes 3491 – 3500 of 5141 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.