Paenibacillus polymyxa strain ZF129

Gram-positiveRodMotileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus polymyxa strain ZF129 is a Gram-positive, rod-shaped bacterium that exhibits motility due to the presence of flagella. This strain is classified as a facultative anaerobe, allowing it to thrive in various oxygen environments. It primarily functions as a chemoheterotroph, utilizing organic compounds for energy. The optimal growth temperature for this strain is 37°C, placing it within the mesophilic temperature range. P. polymyxa strain ZF129 is notable for its ability to sporulate, which can contribute to its survival in diverse habitats. This bacterium is free-living, indicating it does not rely on a host for its existence. However, it has been identified in association with several hosts, including Gallus gallus (domestic chicken), various plant species like Triticum aestivum (wheat), Solanum lycopersicum (tomato), Zea mays subsp. mays (maize), Arachis hypogaea (peanut), and Arabidopsis thaliana (a model organism in plant biology). The presence of three replicons in its genomic structure suggests a complex genetic organization, which may play a role in its adaptability and ecological interactions. The diverse range of associated hosts indicates that P. polymyxa strain ZF129 may have beneficial implications in agriculture, potentially aiding in plant growth or health through interactions within various ecosystems. This highlights the ecological importance of this strain in promoting plant-microbe relationships, which can be crucial for sustainable agricultural practices.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus polymyxa
Strainstrain ZF129

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Paenibacillus polymyxa strain ZF129
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Gallus gallus, Viridiplantae, Triticum aestivum
Cell arrangementNot Available
SporulationSporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Paenibacillus polymyxa strain ZF129 plasmid pAP2, complete

Gene Summary

Adenine Count

11162 bp

Thymine Count

10601 bp

Guanine Count

8738 bp

Cytosine Count

7101 bp

Genome Length

37602 bp

Protein-coding Genes

42 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yqeg family had iiia-type phosphataseFGY93_RS16640Not AvailablePositive3754142 - 375467219989.6
ribosome biogenesis gtpase yqehFGY93_RS16645Not AvailablePositive3754665 - 375579242027.5
shikimate dehydrogenaseFGY93_RS16650Not AvailablePositive3755898 - 375676731274.8
ribosome assembly rna-binding protein yhbyFGY93_RS16655Not AvailablePositive3756835 - 375713111287.7
nicotinate-nucleotide adenylyltransferaseFGY93_RS16660Not AvailablePositive3757149 - 375773922053.6
bis(5'-nucleosyl)-tetraphosphatase (symmetrical) yqekFGY93_RS16665Not AvailablePositive3757723 - 375831922843.5
ribosome silencing factorFGY93_RS16670Not AvailablePositive3758316 - 375866313032.7
s1 rna-binding domain-containing proteinFGY93_RS16675Not AvailablePositive3758660 - 375956834119.6
class i sam-dependent dna methyltransferaseFGY93_RS16680Not AvailablePositive3759571 - 376034430085.6
tautomerase family proteinFGY93_RS16685Not AvailableNegative3760417 - 376080614909.0

Displaying genes 3461 – 3470 of 5141 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.