Paenibacillus polymyxa strain ZF129

Gram-positiveRodMotileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus polymyxa strain ZF129 is a Gram-positive, rod-shaped bacterium that exhibits motility due to the presence of flagella. This strain is classified as a facultative anaerobe, allowing it to thrive in various oxygen environments. It primarily functions as a chemoheterotroph, utilizing organic compounds for energy. The optimal growth temperature for this strain is 37°C, placing it within the mesophilic temperature range. P. polymyxa strain ZF129 is notable for its ability to sporulate, which can contribute to its survival in diverse habitats. This bacterium is free-living, indicating it does not rely on a host for its existence. However, it has been identified in association with several hosts, including Gallus gallus (domestic chicken), various plant species like Triticum aestivum (wheat), Solanum lycopersicum (tomato), Zea mays subsp. mays (maize), Arachis hypogaea (peanut), and Arabidopsis thaliana (a model organism in plant biology). The presence of three replicons in its genomic structure suggests a complex genetic organization, which may play a role in its adaptability and ecological interactions. The diverse range of associated hosts indicates that P. polymyxa strain ZF129 may have beneficial implications in agriculture, potentially aiding in plant growth or health through interactions within various ecosystems. This highlights the ecological importance of this strain in promoting plant-microbe relationships, which can be crucial for sustainable agricultural practices.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus polymyxa
Strainstrain ZF129

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Paenibacillus polymyxa strain ZF129
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Gallus gallus, Viridiplantae, Triticum aestivum
Cell arrangementNot Available
SporulationSporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Paenibacillus polymyxa strain ZF129 plasmid pAP2, complete

Gene Summary

Adenine Count

11162 bp

Thymine Count

10601 bp

Guanine Count

8738 bp

Cytosine Count

7101 bp

Genome Length

37602 bp

Protein-coding Genes

42 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
excinuclease abc subunit uvrcFGY93_RS13435Not AvailablePositive3027348 - 302943279072.6
cpbp family intramembrane glutamic endopeptidaseFGY93_RS13440Not AvailableNegative3029401 - 303113164489.0
trkh family potassium uptake proteinFGY93_RS13450Not AvailablePositive3031945 - 303328548487.0
potassium channel family proteinFGY93_RS13455Not AvailablePositive3033304 - 303398124473.8
lysr family transcriptional regulatorFGY93_RS13460Not AvailableNegative3033987 - 303489233869.3
succinate dehydrogenase cytochrome b558 subunitFGY93_RS13465Not AvailablePositive3035119 - 303579325243.1
succinate dehydrogenase flavoprotein subunitFGY93_RS13470Not AvailablePositive3035887 - 303763264240.5
succinate dehydrogenase iron-sulfur subunitFGY93_RS13475Not AvailablePositive3037652 - 303841928378.3
aminoglycoside n(3)-acetyltransferaseFGY93_RS13480Not AvailablePositive3038589 - 303939829758.2
metallophosphoesteraseFGY93_RS13485Not AvailablePositive3039466 - 304041034401.8

Displaying genes 2821 – 2830 of 5141 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.