Paenibacillus polymyxa strain ZF129

Gram-positiveRodMotileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus polymyxa strain ZF129 is a Gram-positive, rod-shaped bacterium that exhibits motility due to the presence of flagella. This strain is classified as a facultative anaerobe, allowing it to thrive in various oxygen environments. It primarily functions as a chemoheterotroph, utilizing organic compounds for energy. The optimal growth temperature for this strain is 37°C, placing it within the mesophilic temperature range. P. polymyxa strain ZF129 is notable for its ability to sporulate, which can contribute to its survival in diverse habitats. This bacterium is free-living, indicating it does not rely on a host for its existence. However, it has been identified in association with several hosts, including Gallus gallus (domestic chicken), various plant species like Triticum aestivum (wheat), Solanum lycopersicum (tomato), Zea mays subsp. mays (maize), Arachis hypogaea (peanut), and Arabidopsis thaliana (a model organism in plant biology). The presence of three replicons in its genomic structure suggests a complex genetic organization, which may play a role in its adaptability and ecological interactions. The diverse range of associated hosts indicates that P. polymyxa strain ZF129 may have beneficial implications in agriculture, potentially aiding in plant growth or health through interactions within various ecosystems. This highlights the ecological importance of this strain in promoting plant-microbe relationships, which can be crucial for sustainable agricultural practices.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus polymyxa
Strainstrain ZF129

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Paenibacillus polymyxa strain ZF129
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Gallus gallus, Viridiplantae, Triticum aestivum
Cell arrangementNot Available
SporulationSporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Paenibacillus polymyxa strain ZF129 plasmid pAP2, complete

Gene Summary

Adenine Count

11162 bp

Thymine Count

10601 bp

Guanine Count

8738 bp

Cytosine Count

7101 bp

Genome Length

37602 bp

Protein-coding Genes

42 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dihydrolipoyl dehydrogenaseFGY93_RS04800Not AvailableNegative1132902 - 113458760222.6
osmc family proteinFGY93_RS04805Not AvailableNegative1134648 - 113508815803.9
marr family winged helix-turn-helix transcriptional regulatorFGY93_RS04810Not AvailablePositive1135404 - 113571211823.4
5s ribosomal rnaNot AvailableNot AvailablePositive1135967 - 1136083Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive1136235 - 1139181Not Available
16s ribosomal rnaNot AvailableNot AvailablePositive1139585 - 1141138Not Available
mfs transporterFGY93_RS04830Not AvailableNegative1141862 - 114314543684.7
arsr/smtb family transcription factorFGY93_RS04835Not AvailableNegative1143267 - 114393225054.1
glycoside hydrolase family 2 tim barrel-domain containing proteinFGY93_RS04840Not AvailableNegative1144089 - 114643189515.7
nif3-like dinuclear metal center hexameric proteinFGY93_RS04845Not AvailableNegative1146513 - 114730729598.0

Displaying genes 1101 – 1110 of 5141 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.