Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Paroceanicella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Paroceanicella |
| Species | Paroceanicella profunda |
| Strain | strain D4M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Paroceanicella profunda strain D4M1
Gene Summary
Adenine Count
22362 bp
Thymine Count
21954 bp
Guanine Count
34631 bp
Cytosine Count
35109 bp
Genome Length
114056 bp
Protein-coding Genes
122 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | FDP22_RS23450 | Not Available | Negative | 26080 - 26337 | 9237.44 |
| hypothetical protein | FDP22_RS23455 | Not Available | Negative | 26462 - 26722 | 9738.42 |
| hypothetical protein | FDP22_RS23460 | Not Available | Positive | 26924 - 27307 | 13997.6 |
| lytic transglycosylase domain-containing protein | FDP22_RS23465 | Not Available | Positive | 27345 - 27965 | 21715.5 |
| trbc/virb2 family protein | FDP22_RS23470 | Not Available | Positive | 27962 - 28255 | 9986.59 |
| type iv secretion system protein virb3 | FDP22_RS23475 | Not Available | Positive | 28248 - 28526 | 10318.9 |
| type iv secretion system dna-binding domain-containing protein | FDP22_RS23480 | Not Available | Positive | 28516 - 30891 | 88454.2 |
| hypothetical protein | FDP22_RS24675 | Not Available | Positive | 30888 - 31055 | 5770.94 |
| lytic transglycosylase domain-containing protein | FDP22_RS23485 | Not Available | Positive | 31045 - 32199 | 40981.6 |
| type iv secretion system protein | FDP22_RS23490 | Not Available | Positive | 32199 - 33008 | 28995.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
