Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Paroceanicella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Paroceanicella |
| Species | Paroceanicella profunda |
| Strain | strain D4M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Paroceanicella profunda strain D4M1 plasmid pD4M1E, complete
Gene Summary
Adenine Count
22362 bp
Thymine Count
21954 bp
Guanine Count
34631 bp
Cytosine Count
35109 bp
Genome Length
114056 bp
Protein-coding Genes
122 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | FDP22_RS05505 | Not Available | Negative | 1229224 - 1229946 | 24810.8 |
| cupin domain-containing protein | FDP22_RS05510 | Not Available | Negative | 1230022 - 1231146 | 41460.4 |
| gntr family transcriptional regulator | FDP22_RS05515 | Not Available | Positive | 1231322 - 1232020 | 25562.3 |
| fumarylacetoacetate hydrolase family protein | FDP22_RS05520 | Not Available | Negative | 1232039 - 1232950 | 32690.4 |
| low molecular weight protein tyrosine phosphatase family protein | FDP22_RS05525 | Not Available | Positive | 1233145 - 1233477 | 12111.9 |
| imidazole glycerol phosphate synthase subunit hish | FDP22_RS05530 | Not Available | Negative | 1233508 - 1234143 | 23063.9 |
| imidazoleglycerol-phosphate dehydratase hisb | FDP22_RS05535 | Not Available | Negative | 1234140 - 1234733 | 21676.9 |
| atp-dependent protease subunit hslv | FDP22_RS05540 | Not Available | Positive | 1234833 - 1235372 | 18668.6 |
| atp-dependent protease atpase subunit hslu | FDP22_RS05545 | Not Available | Positive | 1235448 - 1236767 | 48658.3 |
| smr/muts family protein | FDP22_RS05550 | Not Available | Negative | 1236850 - 1237452 | 22029.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
