Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Paroceanicella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Paroceanicella |
| Species | Paroceanicella profunda |
| Strain | strain D4M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Paroceanicella profunda strain D4M1 plasmid pD4M1E, complete
Gene Summary
Adenine Count
22362 bp
Thymine Count
21954 bp
Guanine Count
34631 bp
Cytosine Count
35109 bp
Genome Length
114056 bp
Protein-coding Genes
122 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter periplasmic protein lptc | FDP22_RS02735 | Not Available | Positive | 612483 - 613130 | 23016.3 |
| lpta/osta family protein | FDP22_RS02740 | Not Available | Positive | 613142 - 613741 | 20050.6 |
| lps export abc transporter atp-binding protein | FDP22_RS02745 | Not Available | Positive | 613764 - 614540 | 28441.5 |
| rna polymerase factor sigma-54 | FDP22_RS02750 | Not Available | Positive | 614631 - 616067 | 51220.9 |
| ribosome hibernation-promoting factor, hpf/yfia family | FDP22_RS02755 | Not Available | Positive | 616207 - 616788 | 21532.5 |
| pts iia-like nitrogen regulatory protein ptsn | FDP22_RS02760 | Not Available | Positive | 616825 - 617289 | 16356.7 |
| hypothetical protein | FDP22_RS24380 | Not Available | Negative | 617604 - 617756 | 5194.06 |
| udp-glucose 4-epimerase gale | FDP22_RS02765 | Not Available | Negative | 617845 - 618828 | 35763.3 |
| utp--glucose-1-phosphate uridylyltransferase galu | FDP22_RS02770 | Not Available | Negative | 618886 - 619788 | 32432.0 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | FDP22_RS02775 | Not Available | Negative | 620132 - 620926 | 28829.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
