Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
duf4233 domain-containing protein	FCL41_RS04800	Not Available	Positive	1006127 - 1006585	15881.9
plp-dependent aminotransferase family protein	FCL41_RS04805	Not Available	Negative	1006592 - 1007938	47595.0
pyridoxamine 5'-phosphate oxidase family protein	FCL41_RS04810	Not Available	Positive	1008027 - 1008788	26358.3
nucleoside-diphosphate kinase	FCL41_RS04815	Not Available	Positive	1008798 - 1009205	14783.5
hypothetical protein	FCL41_RS04820	Not Available	Positive	1009233 - 1009934	24682.2
rod shape-determining protein	FCL41_RS04825	Not Available	Positive	1010092 - 1011120	36899.8
rod shape-determining protein mrec	FCL41_RS04830	Not Available	Positive	1011120 - 1012037	32363.6
rod shape-determining protein mred	FCL41_RS04835	Not Available	Positive	1012034 - 1012555	18077.0
penicillin-binding protein 2	FCL41_RS04840	Not Available	Positive	1012555 - 1014696	77297.9
rod shape-determining protein roda	FCL41_RS04845	Not Available	Positive	1014693 - 1015874	41256.1

Displaying genes 971 – 980 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.