Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
hypothetical protein	FCL41_RS04550	Not Available	Negative	948628 - 950679	70026.1
sdr family nad(p)-dependent oxidoreductase	FCL41_RS04555	Not Available	Negative	950856 - 951704	30636.3
glutaminase a	FCL41_RS04560	Not Available	Negative	951708 - 952706	35028.9
duf4389 domain-containing protein	FCL41_RS04565	Not Available	Positive	952876 - 954390	54452.5
class c sortase	FCL41_RS04570	Not Available	Negative	954395 - 955297	31995.9
spah/ebpb family lpxtg-anchored major pilin	FCL41_RS04575	Not Available	Negative	955312 - 956832	52080.1
csha/cshb family fibrillar adhesin-related protein	FCL41_RS04580	Not Available	Negative	956928 - 959558	93506.7
bug family tripartite tricarboxylate transporter substrate binding protein	FCL41_RS04585	Not Available	Positive	959957 - 960952	34197.1
tripartite tricarboxylate transporter tctb family protein	FCL41_RS04590	Not Available	Positive	960949 - 961476	18464.7
tripartite tricarboxylate transporter permease	FCL41_RS04595	Not Available	Positive	961476 - 963008	53440.5

Displaying genes 921 – 930 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.