Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
rhs repeat-associated core domain-containing protein	FCL41_RS16700	Not Available	Negative	3500761 - 3501393	22163.4
hypothetical protein	FCL41_RS16705	Not Available	Negative	3501457 - 3501672	7264.32
hypothetical protein	FCL41_RS16710	Not Available	Negative	3501911 - 3502171	8614.53
hypothetical protein	FCL41_RS16715	Not Available	Negative	3502439 - 3502669	8246.16
glycosyltransferase family 87 protein	FCL41_RS16720	Not Available	Negative	3502955 - 3504358	51139.2
transglycosylase domain-containing protein	FCL41_RS16725	Not Available	Negative	3504386 - 3506638	81231.8
padr family transcriptional regulator	FCL41_RS16730	Not Available	Positive	3506732 - 3507394	24987.8
inositol-3-phosphate synthase	FCL41_RS16735	Not Available	Positive	3507424 - 3508506	38629.0
hypothetical protein	FCL41_RS16740	Not Available	Positive	3508653 - 3509429	27043.3
rna polymerase subunit sigma-70	FCL41_RS16745	Not Available	Negative	3509495 - 3510478	35798.2

Displaying genes 3381 – 3390 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.