Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides jishulii
Strainstrain dk3136

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mate family efflux transporterFCL41_RS16600Not AvailablePositive3485681 - 348702145733.8
50s ribosomal protein l9FCL41_RS16605Not AvailableNegative3487094 - 348754015427.5
30s ribosomal protein s18FCL41_RS16610Not AvailableNegative3487555 - 34877918851.99
single-stranded dna-binding proteinFCL41_RS16615Not AvailableNegative3487892 - 348849720393.5
30s ribosomal protein s6FCL41_RS16620Not AvailableNegative3488615 - 348890511078.4
deoxyribonuclease ivFCL41_RS16625Not AvailablePositive3489135 - 348993227986.8
lipid ii:glycine glycyltransferase femxFCL41_RS16630Not AvailablePositive3490126 - 349129843598.7
alanine racemaseFCL41_RS16635Not AvailablePositive3491300 - 349237638675.4
duf4241 domain-containing proteinFCL41_RS16640Not AvailableNegative3492396 - 349301922333.4
hypothetical proteinFCL41_RS16645Not AvailableNegative3493036 - 34932306839.5

Displaying genes 3361 – 3370 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.