Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
ybab/ebfc family nucleoid-associated protein	FCL41_RS15910	Not Available	Negative	3331285 - 3331635	11815.7
dna polymerase iii subunit gamma and tau	FCL41_RS15915	Not Available	Negative	3331723 - 3334017	80546.6
Ncrna_class:srp_rna	Not Available	Not Available	Positive	3334188 - 3334277	Not Available
Trna-ser	Not Available	Not Available	Positive	3334408 - 3334495	Not Available
hypothetical protein	FCL41_RS15930	Not Available	Negative	3334560 - 3334808	8378.17
esab/yukd family protein	FCL41_RS15935	Not Available	Negative	3334805 - 3336115	45118.7
wxg100 family type vii secretion target	FCL41_RS15940	Not Available	Negative	3336118 - 3336408	10578.4
wxg100 family type vii secretion target	FCL41_RS15945	Not Available	Negative	3336419 - 3336742	11374.3
type vii secretion protein eccca	FCL41_RS15950	Not Available	Positive	3336992 - 3340735	133603.0
type ii toxin-antitoxin system vapb family antitoxin	FCL41_RS15955	Not Available	Positive	3340822 - 3341124	11329.5

Displaying genes 3221 – 3230 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.