Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
type ii secretion system f family protein	FCL41_RS15530	Not Available	Negative	3259077 - 3259790	24319.0
type ii secretion system f family protein	FCL41_RS15535	Not Available	Negative	3259787 - 3260440	22748.9
tada family conjugal transfer-associated atpase	FCL41_RS15540	Not Available	Negative	3260449 - 3261597	40272.5
septum site-determining protein ssd	FCL41_RS15545	Not Available	Negative	3261594 - 3262670	36799.1
had family hydrolase	FCL41_RS15550	Not Available	Positive	3262857 - 3263651	28542.9
oxidoreductase	FCL41_RS15555	Not Available	Negative	3263963 - 3264709	26063.1
class i sam-dependent methyltransferase	FCL41_RS15560	Not Available	Positive	3264737 - 3265723	35373.6
sensor histidine kinase	FCL41_RS15565	Not Available	Positive	3265765 - 3266886	40191.9
lytr/algr family response regulator transcription factor	FCL41_RS15570	Not Available	Positive	3266883 - 3267635	27298.8
hypothetical protein	FCL41_RS15575	Not Available	Positive	3267632 - 3268045	15046.4

Displaying genes 3141 – 3150 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.