Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase	FCL41_RS15235	Not Available	Negative	3194118 - 3195500	47416.0
inorganic diphosphatase	FCL41_RS15240	Not Available	Positive	3195753 - 3196247	18613.9
carboxymuconolactone decarboxylase family protein	FCL41_RS15245	Not Available	Negative	3196310 - 3196864	20722.0
sdr family oxidoreductase	FCL41_RS15250	Not Available	Negative	3196861 - 3197745	31403.1
acyl-coa dehydrogenase	FCL41_RS15255	Not Available	Negative	3197791 - 3199830	73257.8
c40 family peptidase	FCL41_RS17665	Not Available	Negative	3199841 - 3201214	47372.4
phosphatase pap2 family protein	FCL41_RS15265	Not Available	Negative	3201585 - 3202667	40566.6
abc transporter atp-binding protein	FCL41_RS15270	Not Available	Negative	3202746 - 3203834	37770.4
abc transporter permease	FCL41_RS15275	Not Available	Negative	3203834 - 3205480	56949.9
thiamine abc transporter substrate binding subunit	FCL41_RS15280	Not Available	Negative	3205527 - 3206585	37378.3

Displaying genes 3081 – 3090 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.