Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
voc family protein	FCL41_RS15085	Not Available	Positive	3161459 - 3162097	22840.1
class i sam-dependent methyltransferase	FCL41_RS15090	Not Available	Positive	3162127 - 3162828	25999.6
dna repair protein rada	FCL41_RS15095	Not Available	Positive	3162884 - 3164281	49090.0
dna integrity scanning diadenylate cyclase disa	FCL41_RS15100	Not Available	Positive	3164389 - 3165474	39221.4
hypothetical protein	FCL41_RS15105	Not Available	Negative	3165520 - 3166314	28384.5
a/g-specific adenine glycosylase	FCL41_RS15110	Not Available	Positive	3166408 - 3167274	31396.3
atp-dependent clp protease atp-binding subunit	FCL41_RS15115	Not Available	Negative	3167373 - 3169946	94514.1
pd40 domain-containing protein	FCL41_RS15120	Not Available	Negative	3170111 - 3171847	60724.6
histone-like nucleoid-structuring protein lsr2	FCL41_RS15125	Not Available	Negative	3172049 - 3172375	11275.0
tolb family protein	FCL41_RS15130	Not Available	Negative	3172599 - 3174359	59563.1

Displaying genes 3051 – 3060 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.