Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
flii/yscn family atpase	FCL41_RS14385	Not Available	Positive	3018140 - 3019465	46159.8
flagellar flij family protein	FCL41_RS14390	Not Available	Positive	3019462 - 3019983	18721.9
transglycosylase slt domain-containing protein	FCL41_RS14395	Not Available	Positive	3019980 - 3020948	32724.9
flagellar hook-length control protein flik	FCL41_RS14400	Not Available	Positive	3020945 - 3022129	38525.4
flagellar hook capping flgd n-terminal domain-containing protein	FCL41_RS14405	Not Available	Positive	3022139 - 3022582	15149.7
flagellar hook-basal body complex protein	FCL41_RS14410	Not Available	Positive	3022641 - 3023495	29106.4
flagellar flbd family protein	FCL41_RS14415	Not Available	Positive	3023659 - 3023967	10789.8
motility protein a	FCL41_RS14420	Not Available	Positive	3023967 - 3024731	26644.6
flagellar motor protein motb	FCL41_RS14425	Not Available	Positive	3024733 - 3025617	32770.2
flagellar basal body-associated flil family protein	FCL41_RS14430	Not Available	Positive	3025614 - 3026063	16094.3

Displaying genes 2911 – 2920 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.