Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
gnat family n-acetyltransferase	FCL41_RS14135	Not Available	Negative	2976194 - 2976811	22830.5
molybdenum cofactor biosynthesis protein b	FCL41_RS14140	Not Available	Negative	2976814 - 2977314	16581.8
cyclic pyranopterin monophosphate synthase moac	FCL41_RS14145	Not Available	Negative	2977311 - 2977787	16039.4
gephyrin-like molybdotransferase glp	FCL41_RS14150	Not Available	Negative	2977811 - 2979052	42712.9
utp--glucose-1-phosphate uridylyltransferase	FCL41_RS14155	Not Available	Negative	2979045 - 2980481	52148.7
5-formyltetrahydrofolate cyclo-ligase	FCL41_RS14160	Not Available	Positive	2980505 - 2981119	21212.2
penicillin acylase family protein	FCL41_RS14165	Not Available	Negative	2981123 - 2983783	96395.1
fmdb family zinc ribbon protein	FCL41_RS14170	Not Available	Positive	2983827 - 2984129	10387.5
saf domain-containing protein	FCL41_RS14175	Not Available	Positive	2984236 - 2984886	22167.6
large conductance mechanosensitive channel protein mscl	FCL41_RS14180	Not Available	Positive	2984934 - 2985308	13373.4

Displaying genes 2861 – 2870 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.