Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
fad-dependent oxidoreductase	FCL41_RS13285	Not Available	Negative	2812683 - 2814077	48061.3
class e sortase	FCL41_RS13290	Not Available	Positive	2814136 - 2814825	23898.4
class i sam-dependent methyltransferase	FCL41_RS13295	Not Available	Negative	2814827 - 2815483	23835.1
trna pseudouridine(38-40) synthase trua	FCL41_RS13300	Not Available	Negative	2815480 - 2816307	29969.9
arsr/smtb family transcription factor	FCL41_RS13305	Not Available	Positive	2816418 - 2816801	14028.5
srpbcc domain-containing protein	FCL41_RS13310	Not Available	Positive	2816798 - 2817343	20260.3
tigr03086 family metal-binding protein	FCL41_RS13315	Not Available	Positive	2817343 - 2817909	20727.2
duf2786 domain-containing protein	FCL41_RS13320	Not Available	Positive	2817979 - 2818722	26443.1
50s ribosomal protein l17	FCL41_RS13325	Not Available	Negative	2818794 - 2819330	19039.6
dna-directed rna polymerase subunit alpha	FCL41_RS13330	Not Available	Negative	2819468 - 2820484	36740.4

Displaying genes 2691 – 2700 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.