Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
amidohydrolase	FCL41_RS12730	Not Available	Negative	2684853 - 2686067	42608.0
hypothetical protein	FCL41_RS12735	Not Available	Negative	2686149 - 2687210	37870.0
hypothetical protein	FCL41_RS12740	Not Available	Negative	2687211 - 2688245	36622.6
hypothetical protein	FCL41_RS12745	Not Available	Negative	2688364 - 2689431	39142.5
hypothetical protein	FCL41_RS12750	Not Available	Negative	2689452 - 2690045	20958.5
bacterial transcriptional activator domain-containing protein	FCL41_RS12755	Not Available	Negative	2690071 - 2692836	97562.8
tade/tadg family type iv pilus assembly protein	FCL41_RS12760	Not Available	Negative	2692833 - 2693270	15620.6
tade/tadg family type iv pilus assembly protein	FCL41_RS12765	Not Available	Negative	2693267 - 2693698	15163.4
tade/tadg family type iv pilus assembly protein	FCL41_RS12770	Not Available	Negative	2693695 - 2694084	14459.8
flp family type ivb pilin	FCL41_RS12775	Not Available	Negative	2694084 - 2694281	7151.86

Displaying genes 2581 – 2590 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.