Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides jishulii
Strainstrain dk3136

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acyl-coa dehydrogenase family proteinFCL41_RS12530Not AvailableNegative2638079 - 263929643193.5
acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alphaFCL41_RS12535Not AvailablePositive2639561 - 264134862833.8
tetr/acrr family transcriptional regulatorFCL41_RS12540Not AvailablePositive2641490 - 264215524083.7
fad-binding dehydrogenaseFCL41_RS12545Not AvailablePositive2642155 - 264386161445.8
spoiid/lytb domain-containing proteinFCL41_RS12550Not AvailableNegative2643882 - 264510544360.0
biotin/lipoyl-containing proteinFCL41_RS17280Not AvailablePositive2645277 - 26455167759.4
nad(p)h-quinone dehydrogenaseFCL41_RS12560Not AvailableNegative2645524 - 264693348707.3
dihydrolipoyl dehydrogenaseFCL41_RS12565Not AvailableNegative2646975 - 264838149457.5
gamma-glutamylcyclotransferase family proteinFCL41_RS12570Not AvailablePositive2648443 - 264889516491.5
fusc family proteinFCL41_RS12575Not AvailableNegative2648934 - 265004339413.6

Displaying genes 2541 – 2550 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.