Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
abc transporter atp-binding protein	FCL41_RS12330	Not Available	Negative	2596844 - 2597629	28208.8
abc transporter permease	FCL41_RS12335	Not Available	Negative	2597631 - 2598527	33207.3
glycosyltransferase	FCL41_RS12340	Not Available	Negative	2598524 - 2600575	76840.9
udp-galactopyranose mutase	FCL41_RS12345	Not Available	Negative	2600572 - 2601777	45657.4
glycosyltransferase family 2 protein	FCL41_RS12350	Not Available	Negative	2601844 - 2602770	33951.7
glycosyltransferase	FCL41_RS12355	Not Available	Negative	2602767 - 2603711	34273.2
lcp family protein	FCL41_RS12360	Not Available	Negative	2603750 - 2605135	49177.9
lcp family protein	FCL41_RS12365	Not Available	Positive	2605445 - 2606650	43330.7
dyp-type peroxidase	FCL41_RS12370	Not Available	Negative	2606677 - 2607888	42750.1
copper chaperone pcu(a)c	FCL41_RS12375	Not Available	Negative	2607888 - 2608463	19830.2

Displaying genes 2501 – 2510 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.