Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
aldo/keto reductase	FCL41_RS11160	Not Available	Positive	2364765 - 2365181	14933.4
Trna-ala	Not Available	Not Available	Positive	2365238 - 2365313	Not Available
histidine phosphatase family protein	FCL41_RS11170	Not Available	Negative	2365384 - 2366025	22858.9
ribosome silencing factor	FCL41_RS11175	Not Available	Negative	2366032 - 2366472	16290.0
nicotinate-nucleotide adenylyltransferase	FCL41_RS11180	Not Available	Negative	2366469 - 2367104	23526.9
hypothetical protein	FCL41_RS17090	Not Available	Negative	2367106 - 2367255	5102.24
glutamate-5-semialdehyde dehydrogenase	FCL41_RS11185	Not Available	Negative	2367285 - 2368532	43287.3
electron transfer flavoprotein subunit alpha/fixb family protein	FCL41_RS11190	Not Available	Negative	2368643 - 2369596	32366.5
electron transfer flavoprotein subunit beta/fixa family protein	FCL41_RS11195	Not Available	Negative	2369609 - 2370400	27469.8
duf6801 domain-containing protein	FCL41_RS17095	Not Available	Negative	2370545 - 2371318	25442.4

Displaying genes 2261 – 2270 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.