Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
phosphotransferase	FCL41_RS11015	Not Available	Positive	2333428 - 2334369	34681.2
30s ribosomal protein s20	FCL41_RS11020	Not Available	Positive	2334509 - 2334769	9266.17
duf4437 domain-containing protein	FCL41_RS11025	Not Available	Negative	2334845 - 2335696	32033.6
dna polymerase iii subunit delta	FCL41_RS11030	Not Available	Negative	2335854 - 2336849	35133.7
comec/rec2 family competence protein	FCL41_RS11035	Not Available	Negative	2336898 - 2339249	80247.9
helix-hairpin-helix domain-containing protein	FCL41_RS17485	Not Available	Negative	2339257 - 2340300	35082.2
degv family protein	FCL41_RS11045	Not Available	Negative	2340399 - 2341259	29414.3
leucine--trna ligase	FCL41_RS11050	Not Available	Negative	2341358 - 2343844	91165.2
alpha/beta fold hydrolase	FCL41_RS11055	Not Available	Negative	2344033 - 2345610	55652.4
isochorismatase family protein	FCL41_RS11060	Not Available	Negative	2345615 - 2346280	23264.6

Displaying genes 2231 – 2240 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.