Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
abc transporter substrate-binding protein	FCL41_RS01015	Not Available	Positive	229262 - 230281	35669.4
siderophore-interacting protein	FCL41_RS01020	Not Available	Positive	230278 - 231096	29725.8
feccd family abc transporter permease	FCL41_RS01025	Not Available	Positive	231102 - 232115	34296.1
feccd family abc transporter permease	FCL41_RS01030	Not Available	Positive	232112 - 233158	35390.0
abc transporter atp-binding protein	FCL41_RS01035	Not Available	Positive	233155 - 233955	28492.6
ai-2e family transporter	FCL41_RS01040	Not Available	Positive	233986 - 235302	45453.9
mfs transporter	FCL41_RS01045	Not Available	Negative	235308 - 236576	43218.2
carboxyl transferase domain-containing protein	FCL41_RS01050	Not Available	Negative	236715 - 238235	52844.6
abc transporter substrate-binding protein	FCL41_RS01055	Not Available	Positive	238447 - 239568	39465.4
abc transporter substrate-binding protein	FCL41_RS01060	Not Available	Positive	239712 - 240746	36192.5

Displaying genes 211 – 220 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.