Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
m4 family metallopeptidase	FCL41_RS09745	Not Available	Positive	2066322 - 2069624	115040.0
m56 family metallopeptidase	FCL41_RS09750	Not Available	Negative	2069765 - 2070613	30342.5
blai/meci/copy family transcriptional regulator	FCL41_RS09755	Not Available	Negative	2070645 - 2071076	15638.6
cytochrome ubiquinol oxidase subunit i	FCL41_RS09760	Not Available	Positive	2071205 - 2072650	52753.7
cytochrome d ubiquinol oxidase subunit ii	FCL41_RS09765	Not Available	Positive	2072664 - 2073704	38134.9
thiol reductant abc exporter subunit cydd	FCL41_RS09770	Not Available	Positive	2073711 - 2077076	117391.0
ribonuclease j	FCL41_RS09775	Not Available	Negative	2077178 - 2078872	61544.1
4-hydroxy-tetrahydrodipicolinate synthase	FCL41_RS09780	Not Available	Negative	2078881 - 2079777	30909.6
llm class f420-dependent oxidoreductase	FCL41_RS09785	Not Available	Negative	2079857 - 2080783	33748.8
protein adenylyltransferase selo	FCL41_RS09790	Not Available	Positive	2080881 - 2082323	51699.2

Displaying genes 1971 – 1980 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.