Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
duf3046 domain-containing protein	FCL41_RS09690	Not Available	Negative	2052134 - 2052328	7316.71
dinb family protein	FCL41_RS09695	Not Available	Negative	2052339 - 2052914	21341.9
atp-dependent helicase	FCL41_RS09700	Not Available	Positive	2053000 - 2057514	161766.0
dna-formamidopyrimidine glycosylase family protein	FCL41_RS09705	Not Available	Positive	2057507 - 2058286	28990.7
helix-turn-helix domain-containing protein	FCL41_RS09710	Not Available	Negative	2058365 - 2058667	10761.0
cina family protein	FCL41_RS09715	Not Available	Negative	2058710 - 2059216	16592.8
cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	FCL41_RS09720	Not Available	Negative	2059232 - 2059852	22506.8
30s ribosomal protein s12 methylthiotransferase rimo	FCL41_RS09725	Not Available	Negative	2059849 - 2061297	51853.8
helix-turn-helix domain-containing protein	FCL41_RS09730	Not Available	Negative	2061457 - 2063406	67564.5
ftsk/spoiiie family dna translocase	FCL41_RS09740	Not Available	Negative	2063403 - 2066006	92254.9

Displaying genes 1961 – 1970 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.