Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
Trna-cys	Not Available	Not Available	Positive	2033253 - 2033323	Not Available
Trna-val	Not Available	Not Available	Positive	2033354 - 2033425	Not Available
doxx family membrane protein	FCL41_RS09600	Not Available	Negative	2033607 - 2034080	16902.1
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	FCL41_RS09605	Not Available	Positive	2034425 - 2035450	34239.3
adenosylcobinamide-gdp ribazoletransferase	FCL41_RS09610	Not Available	Positive	2035447 - 2036214	25729.2
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase	FCL41_RS09615	Not Available	Negative	2036225 - 2036764	18917.6
potassium channel family protein	FCL41_RS09620	Not Available	Negative	2036777 - 2037859	38593.2
yihy/virulence factor brkb family protein	FCL41_RS09625	Not Available	Negative	2037865 - 2038836	35113.4
acyl-coa dehydrogenase family protein	FCL41_RS09630	Not Available	Positive	2038854 - 2040488	57892.0
hypothetical protein	FCL41_RS09635	Not Available	Positive	2040620 - 2041501	32446.2

Displaying genes 1941 – 1950 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.