Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides jishulii
Strainstrain dk3136

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxal 5'-phosphate synthase glutaminase subunit pdxtFCL41_RS07750Not AvailablePositive1656361 - 165696020987.4
yebc/pmpr family dna-binding transcriptional regulatorFCL41_RS07755Not AvailablePositive1656999 - 165776326855.6
phox family proteinFCL41_RS07760Not AvailableNegative1657798 - 165991575988.8
crossover junction endodeoxyribonuclease ruvcFCL41_RS07765Not AvailablePositive1660133 - 166070519895.0
holliday junction branch migration protein ruvaFCL41_RS07770Not AvailablePositive1660702 - 166129820410.6
holliday junction branch migration dna helicase ruvbFCL41_RS07775Not AvailablePositive1661300 - 166239139208.1
preprotein translocase subunit yajcFCL41_RS07780Not AvailablePositive1662444 - 166272210044.3
adenine phosphoribosyltransferaseFCL41_RS07785Not AvailablePositive1662761 - 166327917758.5
rela/spot family proteinFCL41_RS07790Not AvailablePositive1663367 - 166559883131.6
duf349 domain-containing proteinFCL41_RS07795Not AvailableNegative1665713 - 166695146081.7

Displaying genes 1571 – 1580 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.