Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
acyl-coa dehydrogenase family protein	FCL41_RS07700	Not Available	Positive	1646258 - 1647430	42330.8
hpch/hpai aldolase/citrate lyase family protein	FCL41_RS07705	Not Available	Positive	1647430 - 1648263	29659.3
hypothetical protein	FCL41_RS07710	Not Available	Positive	1648527 - 1649789	42888.2
threonine--trna ligase	FCL41_RS07715	Not Available	Positive	1649973 - 1651961	74232.8
hit family protein	FCL41_RS07720	Not Available	Positive	1651965 - 1652489	19012.8
inositol monophosphatase family protein	FCL41_RS07725	Not Available	Positive	1652486 - 1653283	27623.3
phosphatidylinositol phosphate synthase	FCL41_RS07730	Not Available	Positive	1653296 - 1653919	21698.1
spermidine synthase	FCL41_RS07735	Not Available	Positive	1653924 - 1654727	28059.4
pyridoxal 5'-phosphate synthase lyase subunit pdxs	FCL41_RS07740	Not Available	Positive	1654804 - 1655727	32327.9
duf6891 domain-containing protein	FCL41_RS07745	Not Available	Positive	1655785 - 1656351	20462.3

Displaying genes 1561 – 1570 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.