Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
catalase/peroxidase hpi	FCL41_RS07650	Not Available	Positive	1635781 - 1637976	80549.9
maoc family dehydratase	FCL41_RS07655	Not Available	Positive	1638192 - 1638728	19974.6
llm class flavin-dependent oxidoreductase	FCL41_RS07660	Not Available	Positive	1638733 - 1639767	37503.4
caib/baif coa transferase family protein	FCL41_RS07665	Not Available	Positive	1639764 - 1640993	44729.9
mmge/prpd family protein	FCL41_RS07670	Not Available	Positive	1640993 - 1642396	46474.2
rida family protein	FCL41_RS07675	Not Available	Positive	1642393 - 1643634	45108.5
maoc family dehydratase n-terminal domain-containing protein	FCL41_RS07680	Not Available	Positive	1643644 - 1644159	18357.5
maoc/paaz c-terminal domain-containing protein	FCL41_RS07685	Not Available	Positive	1644156 - 1644632	17074.2
acetyl-coa acetyltransferase	FCL41_RS07690	Not Available	Positive	1644629 - 1645777	39923.2
zn-ribbon domain-containing ob-fold protein	FCL41_RS07695	Not Available	Positive	1645774 - 1646199	15390.2

Displaying genes 1551 – 1560 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.