Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides jishulii
Strainstrain dk3136

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3,4-dihydroxy-2-butanone-4-phosphate synthaseFCL41_RS17620Not AvailablePositive1580741 - 158129820132.8
3,4-dihydroxy-2-butanone-4-phosphate synthaseFCL41_RS17625Not AvailablePositive1581264 - 15814737345.09
lysophospholipid acyltransferase family proteinFCL41_RS07430Not AvailablePositive1581470 - 158268143633.4
mmpl family transporterFCL41_RS07435Not AvailablePositive1582701 - 158493577129.3
duf2892 domain-containing proteinFCL41_RS07440Not AvailableNegative1585056 - 15852597090.97
hypothetical proteinFCL41_RS17010Not AvailableNegative1585274 - 15854355827.14
mmpl family transporterFCL41_RS07445Not AvailableNegative1585493 - 158764975460.5
hypothetical proteinFCL41_RS07450Not AvailablePositive1587944 - 158828812171.7
type iii polyketide synthaseFCL41_RS07455Not AvailablePositive1588392 - 158947137553.2
isoprenylcysteine carboxyl methyltransferase family proteinFCL41_RS07460Not AvailablePositive1589468 - 159001919730.4

Displaying genes 1501 – 1510 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.