Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides jishulii
Strainstrain dk3136

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l35FCL41_RS07125Not AvailablePositive1516207 - 15164017027.72
50s ribosomal protein l20FCL41_RS07130Not AvailablePositive1516484 - 151686714355.4
trmh family rna methyltransferaseFCL41_RS07135Not AvailablePositive1516877 - 151765627025.1
duf4031 domain-containing proteinFCL41_RS07140Not AvailablePositive1517677 - 15179168882.56
hd domain-containing proteinFCL41_RS07145Not AvailableNegative1517864 - 151851423653.3
pas domain-containing sensor histidine kinaseFCL41_RS07150Not AvailablePositive1518544 - 151959638134.3
response regulator transcription factorFCL41_RS07155Not AvailablePositive1519688 - 152038625529.5
duf4153 domain-containing proteinFCL41_RS07160Not AvailablePositive1520383 - 152295989828.8
phenylalanine--trna ligase subunit alphaFCL41_RS07165Not AvailablePositive1523190 - 152428740337.6
phenylalanine--trna ligase subunit betaFCL41_RS07170Not AvailablePositive1524298 - 152679086982.5

Displaying genes 1441 – 1450 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.