Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
hypothetical protein	FCL41_RS17320	Not Available	Positive	142286 - 142429	4952.9
helicase-related protein	FCL41_RS00635	Not Available	Positive	142434 - 143426	34560.9
duf5701 family protein	FCL41_RS00640	Not Available	Positive	143552 - 144217	23748.5
type ii caax prenyl endopeptidase rce1 family protein	FCL41_RS00645	Not Available	Positive	144227 - 144919	24602.7
nad(p)h-binding protein	FCL41_RS00650	Not Available	Negative	145007 - 145900	32254.6
pyridoxamine 5'-phosphate oxidase family protein	FCL41_RS00655	Not Available	Positive	146010 - 146429	15896.8
hypothetical protein	FCL41_RS00660	Not Available	Negative	146419 - 147066	23137.0
padr family transcriptional regulator	FCL41_RS00665	Not Available	Positive	147305 - 147907	22287.2
abc transporter atp-binding protein	FCL41_RS00670	Not Available	Positive	147904 - 148617	24628.4
abc transporter permease	FCL41_RS00675	Not Available	Positive	148617 - 151265	91868.5

Displaying genes 131 – 140 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.