Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
phosphotransferase family protein	FCL41_RS06575	Not Available	Positive	1402843 - 1403754	32882.1
30s ribosomal protein s1	FCL41_RS06580	Not Available	Positive	1403994 - 1405469	54381.8
dephospho-coa kinase	FCL41_RS06585	Not Available	Positive	1405593 - 1406228	22254.7
rna polymerase sigma factor rpod/siga	FCL41_RS06590	Not Available	Negative	1406268 - 1407233	35590.3
s9 family peptidase	FCL41_RS06595	Not Available	Negative	1407445 - 1409622	79945.9
lamb/ycsf family protein	FCL41_RS06600	Not Available	Positive	1409721 - 1410410	23752.1
5-oxoprolinase subunit b family protein	FCL41_RS06605	Not Available	Positive	1410422 - 1411045	21778.9
biotin-dependent carboxyltransferase family protein	FCL41_RS06610	Not Available	Positive	1411042 - 1411875	27956.9
dna polymerase iv	FCL41_RS06615	Not Available	Negative	1411891 - 1413204	46689.5
duf4192 domain-containing protein	FCL41_RS06620	Not Available	Positive	1413362 - 1414333	34334.6

Displaying genes 1331 – 1340 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.