Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides jishulii
Strainstrain dk3136

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseFCL41_RS06275Not AvailablePositive1332497 - 133388847182.3
phospho-n-acetylmuramoyl-pentapeptide- transferaseFCL41_RS06280Not AvailablePositive1333885 - 133495838377.5
hypothetical proteinFCL41_RS06285Not AvailablePositive1334955 - 133598336500.1
putative lipid ii flippase ftswFCL41_RS06290Not AvailablePositive1336098 - 133734843985.2
undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseFCL41_RS06295Not AvailablePositive1337361 - 133843136843.1
udp-n-acetylmuramate--l-alanine ligaseFCL41_RS06300Not AvailablePositive1338428 - 133986749242.3
cell division protein ftsq/divibFCL41_RS06305Not AvailablePositive1339886 - 134065928179.1
cell division protein ftszFCL41_RS06310Not AvailablePositive1340891 - 134214142668.5
polyphenol oxidase family proteinFCL41_RS06315Not AvailablePositive1342150 - 134285124095.4
yggs family pyridoxal phosphate-dependent enzymeFCL41_RS06320Not AvailablePositive1342848 - 134354924408.1

Displaying genes 1271 – 1280 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.